rs31151143 SNP Detail

Summary

• ID
  rs31151143
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:63405899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTGGAAGGTG CCACTGTGCC CCAGGATGAT GCTCTGTAGC ACCTACGTGG TATGCAATGG
  CAGCAGCCCT AGATCCATAA TCAGTACCTT CCAGCTGAGC ACATCTTTTC CCTACAAAGA
  GCAGGATGCA TGGCCAGACC TTGGTGACCT CCATATCAAG TACAAAGCTC AGCAGACAAC
  CCCACTGCTA AAGGGCACAC AGCCAAGGCC CCTCTCTTAC TGGGGCCCCT TTCCCTGTTT
  CAACCTTGAA GCTGACACTC TTTACCATCC CCGGCAAGCC AACCTAAAAC TCAACTCTCT
  Y
  CAAACTCAAG TGAAAGGAGG GATTTCTGCC TGGGTGGTGG TCAGCACAGG TCTGCCAGCC
  TTGCTTCTAC TGACCTAGCC ACAGCAGCTC ATCCTTCTGG AACCTGCTTG AGCAGAGGAA
  AAGAATAAAG TGAGGAGCAA TGGCTTCTCC CTTCTCTTCT AAAGACCAGA AAAGGCCTGC
  CCAGGCATGT ACTAGTTCCT GACACACCCA GATGCAGGCT GGAGAGATGC TGTCTTTCCA
  ATGACTCTCC TCACAGGAAG GTCCCTCTTT GGAGAACTTA TGGCAGCTGC CTACCCAGCA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46003125	mCV25346969	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31151143					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:63405899 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19187	CpG island 19187	636 bp distal
Cpgi19188	CpG island 19188	1097 bp proximal
Otud7a	OTU domain containing 7A	within coordinates