rs31151635 SNP Detail

Summary

• ID
  rs31151635
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110081134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTTCACTG CAGTTCGACT
  AGAAAAGAGT AAAACCTCAC TCTACCTGGC CAGTGAGCAA GAGGCAGGGA CCTTAGGATA
  CTTAGTACAT AATAAGAATA AAGTTCATTT GATTGTGAAT TTATCTTACT TTTAACTGTC
  GAATGATTGA TTAGACTCCC TCCTGATAAC TGGGGCATCC TTTTGTTATC TCTTATAGGA
  R
  ATGCCAAATG CTCGTTTGAA GTCTACTTCC AGGGAGATCT GAATCTCATT GTAATTATTG
  TAATATGTAT AGACATTGTA ATTATTAACA GTTTTCTTTT CTTTCTTTTT TTTTTTTTTT
  CCTGTTGGGG TTGAATAAAG CTGGGGCAGC AGGGCCCACC TTTAATCCCA GGACACAGGA
  GGCAGAAGCA GGTGGATCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47521615	NES11196803	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31151635					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47521615	NES11196803	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110081134 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21012	CpG island 21012	1221 bp distal
Rr669673	regulatory region 669673	736 bp distal