rs31153640 SNP Detail

Summary

• ID
  rs31153640
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126218895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTTGTTT GTCTTGTGTT
  TTGAGATTGC AATCCCCCTG CCTCCATCCC CCTAAAGTCA GGCTTACAGT GGCAAGCACT
  GGACTTGGCC AGAGTGAACT TGTGCTTATG AGCAGCACAT GGCTTCCTAG TTAGGGTGGT
  TACATAGTTT CCTTTTTAAA TGCGCTTGAG TAAAACAGGT AAAGGGGTGG TTTTTCAATG
  M
  CAAGTAGATA CAATATAGCA CGTGAGCCTC AGGGGACAGA CCTGGAAGGA ACGCTGTGTG
  AGAGATGACG TTGGGGAATC CCCATGGCAC CCAGCATAGC AGTTGCTACG GCTATGACTG
  TCACTAGCAT TATCTTTAAG GGGTATTAGT TGAAAATTAA CTTTGAGTCA TCCTGAAATT
  TATATGAATG CATGCATATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46002477	mCV22749724	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss145875022	ENSMUSSNP1112505	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31153640					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126218895 () rs orientation: forward

Symbol	Name	Function Class
Gm39086	predicted gene, 39086	1242 bp upstream
Gm39087	predicted gene, 39087	1976 bp upstream
Rr655535	regulatory region 655535	within coordinates
Rr655536	regulatory region 655536	1737 bp proximal