rs31156961 SNP Detail

Summary

• ID
  rs31156961
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:64943919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCTTTTC TTAGAGTTGC
  AAAAGTAAAC TCATATGAAA GCCCAAGAGA AGGAAGAGGA GGTGGGGGGG GGGGGGCGGG
  CAGTAAAGAG GAGGAGAGGG AGGGGAAGGA AGGGAAGGAG GAGCTACCAG TTCTTTTGTC
  TGAAAGGTCT CATGAAAACA AAACAAAAGA AAACAAACAG AAAACAAATA AACAGTGAAT
  K
  GCAACTGCCA CTGGAGTCCT GACCCATGTT GCTAGTAAAA TTCTCCAAAC TGTAACCATA
  GAATTTGAAT AATTAATTCT GAAAACATAT GAATAAGTTT TTATATGTAT ATGATTAATT
  TTATATTTAT GACTTATTGC TTACCCCCCC AAAAAAAAAA CCAGAAGTGG AACTAAAAAA
  AGAAAAGAAA AGAAACAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss48021318	NES12050485	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	T	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs31156961					SNP	G	G	G	G	G	G	T	G	G	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48021318	NES12050485	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:64943919 () rs orientation: forward

Symbol	Name	Function Class
D15Mit234	DNA Segment, Chr 15, Massachusetts Institute of Technology 234	267 bp proximal