rs31157091 SNP Detail

Summary

• ID
  rs31157091
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33873862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCTTTTCT CCTTTCCTGT CAACATAATT ACAGAGCCTT
  TCTCTCAAAA TAGCATGTCC TTAGTCCAGT AACCAGAAAT CATTAAAGGT TTAGCTTCCT
  Y
  TGTCCCAGAG GAATTTTAAT ATAACCACCA AACTCGTAAC CACATGCATT CTGATAATTA
  AAATAATTCA AAGCAATTAA AGCAATCTAA ACAAATATC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46003902	mCV23705548	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
ss322148789	CHEV_7_34959456	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31157091					SNP	T	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33873862 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	1275 bp upstream
Rr156123	regulatory region 156123	1862 bp distal
Rr170511	regulatory region 170511	1862 bp distal
Rr170512	regulatory region 170512	862 bp distal
Rr380644	regulatory region 380644	1250 bp upstream