rs31157805 SNP Detail

Summary

• ID
  rs31157805
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:64944457 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTAATGGCAT TCCTAATATG CAATTGTGGT GTCTTCCACA GGAGGCAGGC
  CTAAAACACT CAACTGTTTT TCCTATCATG ATTTTCCTTC TCCTTGAGGT GCTGGGGGCA
  GTATAAACTC TACAAAAAAG ATGCTTGCAA TTGCCTTCCT TACTGCTTCC ATTAACCACT
  W
  ACCTTCCTTC TTGATTAGTC TTCAGCCTTT GTGTGTGGTT TGGGGAAGAA AAGAAAAAAA
  TGGCTTTCAA AGGCATTCAA GAGCAGGATA AGAATGTGAC AGTAATTGGT ATTTGGAGGC
  AATGTAGACC ATGACAATAT ACACTGCTGG TATCCATAGA GAGGAACATA GTATCTACTG
  AAGAATGCCT CTGGAAGAAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss39365542	mCV22703955	ABI	CRAMUS_MOUSE	f	SNP	A	T					A
ss48021322	NES12050478	PERLEGEN	MM_PANEL2	f	SNP		T	T	A	A	A		A	A	A	A	A	A
ss148026170	ENSMUSSNP4897838	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs31157805					SNP	A	T	T	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48021322	NES12050478	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:64944457 () rs orientation: forward

Symbol	Name	Function Class
D15Mit234	DNA Segment, Chr 15, Massachusetts Institute of Technology 234	149 bp distal