rs31161526 SNP Detail

Summary

• ID
  rs31161526
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45354919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTG AAGCGTCCTG ATCCTGGAGG
  Y
  TTGCACGCCG CGCTCTCCCG ACTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46003851	mCV25295234	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss149142266	ENSMUSSNP6088622	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31161526					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45354919 () rs orientation: forward

Symbol	Name	Function Class
Car11	carbonic anhydrase 11	813 bp downstream
Cpgi19081	CpG island 19081	within coordinates
Cpgi19082	CpG island 19082	1005 bp proximal
Dbp	D site albumin promoter binding protein	within coordinates
Rr400318	regulatory region 400318	480 bp downstream
Tssr66612	transcription start site region 66612	203 bp downstream
Tssr66613	transcription start site region 66613	188 bp downstream
Tssr66614	transcription start site region 66614	146 bp downstream
Tssr66615	transcription start site region 66615	103 bp downstream
Tssr66616	transcription start site region 66616	72 bp downstream
Tssr66617	transcription start site region 66617	42 bp downstream
Tssr66618	transcription start site region 66618	23 bp upstream
Tssr66619	transcription start site region 66619	696 bp upstream
Tssr66620	transcription start site region 66620	735 bp upstream
Tssr66621	transcription start site region 66621	1633 bp upstream
Tssr72444	transcription start site region 72444	1410 bp downstream