rs31162028 SNP Detail

Summary

• ID
  rs31162028
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:73334101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AACAAGAAAC AGGACCATGT GCCTGGATAC AGTGAAATTA TTTTAGTAGT TGGACATTGG
  AATCTCACTG TGCACTGGCC ACTCAAGTCT TTTGCTATCA CCTGTAAGCC AAATGGCAAT
  GTGGTGGAAT TCATAAAGGT GATAAAACAA AGCTGGGCGG TGGTGGCACA CACCTTTGAT
  CCCAGCACTT GGGAGGCAGA GGCAGGCGGA TTTCTGAGTT CCATGCCAGC CTGGTCTACA
  AAAGTGAGTT CCAGGACAGC CAGGACTATA AAGAGAAACC CTGTCTCGAA CCCCCCCCCC
  M
  CAAAAAAAAG GTGATAAAAC AAGAGTAATA AACTAACTTC AAAACCTCAA GTGAAGTCAG
  ACATGATGGT ACACACCTGA TCTTAGTTAT CTTAGCACTA GGCAGGCTGA AGCAGGAACA
  TTGCCTTGTG TTAAGTGTGG GAGGCAAAGG TAGGCAGATC TCTATGAGTT CAGGGCCAGC
  CAGATCTAGG CCAGCTAGAA CTACATAGTG AGAACCTGTC TGGAGGAAAA TTAGGTGTAC
  ATAGTGATGA AGTCCTTGGG GTCTCAGTAT TTGAGGCCAG CCCAGTTTAC ATAGTAAGTT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46490604	mCV22545811	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31162028					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:73334101 () rs orientation: forward

Symbol	Name	Function Class
B230340J04Rik	RIKEN cDNA B230340J04 gene	528 bp upstream
Tafazzin	tafazzin, phospholipid-lysophospholipid transacylase	344 bp downstream