rs31172718 SNP Detail

Summary

• ID
  rs31172718
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:78964150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAGAATTGG TGCAGTGCAG CTCCTAGTTT TGAGACAACA
  GTACCATGCC CTAAAGGATC AAGTGCATCA GGGAGAAGAT AGTGTCTAGT TCTAAGATTA
  S
  AACTACTAAC AAGTAGAAGT GAGGAATGAA ATACAAAACA AAACAAAACA AAACAAAACA
  AAACAAAAAA TAAAACAAAA AATTCTAGGC CTTTAGGCC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	LG/J	SM/J
ss46492156	mCV24448791	ABI	CRAMUS_MOUSE	f	SNP	G	C
ss134221133	ENSMUSSNP6917324	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss325899161	CHEV_X_77165883	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	LG/J	SM/J
rs31172718					SNP	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:78964150 () rs orientation: forward

Symbol	Name	Function Class
Rr395274	regulatory region 395274	within coordinates