rs31174435 SNP Detail

Summary

• ID
  rs31174435
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:172026408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGGT GGTGGCGCAC GCCTTTAATC
  M
  CAGCACTTGG GAGGCAGAGG CAAGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45003625	mCV23615039	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss120007288	PARCsnp_1.17722	PARC_SEQ	INBRED	f	SNP			C	A
ss146183711	ENSMUSSNP3067673	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss320123170	CHEV_1_174128972	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31174435					SNP	A	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172026408 () rs orientation: forward

Symbol	Name	Function Class
Pea15a	proliferation and apoptosis adaptor protein 15A	within coordinates
Rr28998	regulatory region 28998	1592 bp proximal
Tssr10176	transcription start site region 10176	605 bp downstream
Tssr10177	transcription start site region 10177	216 bp downstream
Tssr10178	transcription start site region 10178	170 bp downstream
Tssr15149	transcription start site region 15149	1077 bp upstream
Tssr15150	transcription start site region 15150	967 bp upstream
Tssr15151	transcription start site region 15151	930 bp upstream
Tssr15152	transcription start site region 15152	780 bp upstream
Tssr15153	transcription start site region 15153	762 bp upstream
Tssr15154	transcription start site region 15154	639 bp upstream
Tssr15155	transcription start site region 15155	498 bp upstream
Tssr15156	transcription start site region 15156	325 bp upstream
Tssr15157	transcription start site region 15157	282 bp upstream
Tssr15158	transcription start site region 15158	301 bp downstream
Tssr15159	transcription start site region 15159	353 bp downstream
Tssr15160	transcription start site region 15160	381 bp downstream
Tssr15161	transcription start site region 15161	1643 bp downstream
Tssr15162	transcription start site region 15162	1700 bp downstream
Tssr15163	transcription start site region 15163	1716 bp downstream