rs31174571 SNP Detail

Summary

• ID
  rs31174571
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:76476625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTTTTCAAA ATACACTTTA ATTAGGGTTT TCAAACACTT CAACCTCCTT TCTAGCGCAG
  TGATCAAAGA TAGTGGAAGA TGATGGTTAA TAGGCAAGGG GAATGTAGAC CTGTTAAGAA
  GTAGTTCTTT GGGGTTGATT CCAATCATCA TTATCAGGAT ATCAGCAGTC CAGTCCAGAA
  AATTATATAT GAAACAGGAG CAGCAGTCTG CTCTCATCTC TCTCTCTCTC TCTCTCTCTC
  TCTCTCTCTC TCTCTGTATA TATATATATA TATATATATA TATATATATA TATATAGATA
  K
  ATAGATAGAT AGACACACAC ACACACAGGC TCAGCAAAAT TGTTATGAGT CTGCAGAAGC
  AGCCAGAATA CCATGAGGTG CTTTCTTTCT ACAAAGTCAT AACAAGTAAT GATCAGTGAA
  GACCAACAAA GTGTTGCAAG GTGAACCAAT TCAGGAGCTT CCTTCACTGC CTGTTGGGTT
  ATGCTTATAC TCTTTCCAAA CCATCACGTA TCCTCTCAAG TGACGACCTC AGCAAAACAT
  CCTCTCACAT GTCTGCTTCA GCAAAACAAC CTCTCATTAA GAGAGCGTCC AGACAAACAT
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss45505753	mCV24588114	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs31174571					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:76476625 () rs orientation: forward

Symbol	Name	Function Class
Fstl5	follistatin-like 5	Intron
Rr578399	regulatory region 578399	1776 bp distal