rs31175772 SNP Detail

Summary

• ID
  rs31175772
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102335122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTA AGATCCAGTT GTGCACTAAC
  K
  AATACTGAAC TCAAAGGCCC ATGTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
ss46004616	mCV24696495	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss145571382	ENSMUSSNP5395393	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T			T
ss322357783	CHEV_7_109834429	CHEVERUD	SCREENING_POP	f	SNP				T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
rs31175772					SNP	T	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102335122 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	1059 bp proximal
Gm45527	predicted gene 45527	within coordinates
Rr652623	regulatory region 652623	726 bp proximal
Rr652624	regulatory region 652624	1345 bp proximal
Trim68	tripartite motif-containing 68	within coordinates
Tssr73953	transcription start site region 73953	1337 bp downstream