rs31175966 SNP Detail

Summary

• ID
  rs31175966
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74711797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATA TGGCGAAAAC ACTGAAAACA
  W
  GGAAAGTGAG AAATACACAC TGTAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss46492583	mCV22796105	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss134209477	ENSMUSSNP2561390	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss325896876	CHEV_X_72913530	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31175966					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74711797 () rs orientation: forward

Symbol	Name	Function Class
Tssr161358	transcription start site region 161358	75 bp downstream