rs31178210 SNP Detail

Summary

• ID
  rs31178210
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:47718543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACA GAGGAACCCT GTCTTAAAAA
  R
  CCATCAAACA AAACAACCTC CTGTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45003774	mCV25365534	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss146469437	ENSMUSSNP2622443	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31178210					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:47718543 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11035	CpG island 11035	782 bp proximal
D19Dcr55	DNA Segment, Chr 19, Derry C. Roopenian 55	1996 bp distal
Gm58934	predicted gene, 58934	within coordinates
Rr370527	regulatory region 370527	983 bp upstream
Rr406020	regulatory region 406020	1834 bp upstream
Rr549123	regulatory region 549123	332 bp proximal
Rr549124	regulatory region 549124	1093 bp proximal
Rr549125	regulatory region 549125	1234 bp proximal
Rr549126	regulatory region 549126	1362 bp proximal
Rr549127	regulatory region 549127	1445 bp proximal
Rr549128	regulatory region 549128	1589 bp proximal
Sfr1	SWI5 dependent recombination repair 1	1616 bp upstream
Tssr156884	transcription start site region 156884	1639 bp upstream
Tssr156885	transcription start site region 156885	1670 bp upstream