rs31179045 SNP Detail

Summary

• ID
  rs31179045
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:96240139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCCATGAAG TGCTGAGAAG AATATATGGT CTTTTTTGTT
  CAGATAAAAT ATTCTGTAAA TATATGTTCA GTCCCCAGGT TTTGTAATAT CAGTTTGCTT
  M
  AGCATCTGTT TTGTCTGGAT GACCTCTCTA TTGGCAATGG TGGAATATTA ACGTCACTCA
  GTATCACTGT ATATTAAGGC TAATAAGTGA TTAAGCTAT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45004100	mCV24369115	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
ss144980181	ENSMUSSNP7093568	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31179045					SNP	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:96240139 () rs orientation: forward

Symbol	Name	Function Class
Gm37076	predicted gene, 37076	828 bp upstream
Gm70484	predicted gene, 70484	884 bp upstream
Tssr167	transcription start site region 167	827 bp upstream