rs31184076 SNP Detail

Summary

• ID
  rs31184076
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44889881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTCCCAG CATGAGATTC
  CTAGGGGGAG ATTCCCCTTT CTTTGTGCTT CATTGTCCCA ATAATCGGAC AGATAGGTTG
  AGACACTTAG CTTATCTTCC CTTCCTCCTG TGGGGTCTGG GATGGAACAC CGTTTGGTGG
  CACATCTGGG CCTCTCATTT GCCAGTTTTT AATTCTTATC TGCTGTCCTT AAAATCCCTA
  R
  TTGGCCTTTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTT
  TATTTTGCTC CTGAAAGGGA GGCGTTTAGT AATTAACAGT GGTTTGAAAT CAACACGGAA
  TAATTGTGAA GATTAAGTCT TTGCACCATT TCTGCCTGTG GCATCAAGGA ATCAAAGCAC
  TGGGGTCACA CAGGGGTGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46005330	mCV27566845	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31184076					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44889881 () rs orientation: forward

Symbol	Name	Function Class
Cd37	CD37 antigen	1342 bp upstream
Cpgi19038	CpG island 19038	113 bp proximal
Rr380753	regulatory region 380753	within coordinates
Slc6a16	solute carrier family 6, member 16	628 bp upstream
Tssr66503	transcription start site region 66503	617 bp upstream
Tssr66504	transcription start site region 66504	652 bp upstream
Tssr72351	transcription start site region 72351	1701 bp upstream
Tssr72352	transcription start site region 72352	1593 bp upstream
Tssr72353	transcription start site region 72353	1391 bp upstream
Tssr72354	transcription start site region 72354	1354 bp upstream
Tssr72355	transcription start site region 72355	1324 bp upstream
Tssr72356	transcription start site region 72356	1170 bp upstream
Tssr72357	transcription start site region 72357	1162 bp upstream
Tssr72358	transcription start site region 72358	1137 bp upstream
Tssr72359	transcription start site region 72359	1107 bp upstream
Tssr72360	transcription start site region 72360	1070 bp upstream
Tssr72361	transcription start site region 72361	1047 bp upstream