rs31185467 SNP Detail

Summary

• ID
  rs31185467
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185318299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTGGTTT CCTGATGTCC
  ATCCAGTCCG TGCCAGGTCC CCTTGCCCCA TTGCCTGCTT TAAGCAGAAA TCAGTTTCAA
  CTGTCTTATA GGTCTCCTGC CTCAGTCTCC ATCCCCATTA CAAGTGTTCC TCACTAATCT
  TGCTTCAGTG ACCTTTTGCT GGAGAGACGC TGGGTCAGAC AACCTGGGAT ACCTGAGATG
  Y
  AGAAACGCTA CTGTAGAGAA CAGCATGATG GTACTTGCTG TGTGTTCCAA AGGTAAAAGT
  ACTGTTGAGC CTCATTCCCC AAAGCTGCAA GCTTGGTCTT ACCTGTCTCA TGGCAGCCCA
  AGCTATGACA TGGCACGTCT CAGGAATGTG TATCATCTGA ATCGGCTGAG TTCAGACTGC
  CTTCCTGTCC CACATTTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45004224	mCV24549047	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss146436939	ENSMUSSNP1440940	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss320177540	CHEV_1_187409981	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31185467					SNP	T	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185318299 () rs orientation: forward

Symbol	Name	Function Class
Rr425414	regulatory region 425414	713 bp distal
Rr425415	regulatory region 425415	1544 bp proximal