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rs31187630 SNP Detail
Summary
  • ID
    rs31187630
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr1:96085650 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      ATAAAAAAA CCATAATACC TTACTTTAAA
    TCATAGGGTT TCTTCACTGG TTATTTGTCC AATGAAGCTT ATAAGTTTAA AAAGTATTCA
    TTAATTCACT ACTAATACTA TAAACATCTG GCCAGAATTT TATAAAAAGC TTATTCATGC
    R
    CACAGTTTTA ATATTCTCCC TTTTCAGAAT AAAATTTATA TCTAGAAACA TATACAAATA
    CATGAAATTA AACATAAGTT CAAAACGATA GGCTAATAAA GAGTTAAAAA TCATAATTGC
    ATATGGTTTT TGATATATAA AACTGAAATA                                 
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45004448 mCV23090469 ABI CRAMUS_MOUSE f SNP A G G A
ss144978505 ENSMUSSNP3908085 ENSEMBL ENSEMBL_Sanger f SNP A G A
ss319850686 CHEV_1_98054502 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs31187630 SNP A G G A G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:96085650 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm69977 predicted gene, 69977 within coordinates
Rr371742 regulatory region 371742 673 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory