rs31188277 SNP Detail

Summary

• ID
  rs31188277
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37915049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG CCAACAGGTG GCCCTGTAGC
  Y
  AGTCCCCGCC TCACAGGGAG CTTGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45506437	mCV24929743	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss134816160	ENSMUSSNP898572	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss320713519	CHEV_3_37759822	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31188277					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37915049 () rs orientation: forward

Symbol	Name	Function Class
Rr575577	regulatory region 575577	306 bp distal