rs31188693 SNP Detail

Summary

• ID
  rs31188693
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:105759353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGTGGGCTT TGAGGTTTCA AAAGGCTAAC TACCCCAGTT
  AGCTCTTTTT GCCTCATGCT TGTGGATCAA ATGTAAGCTC TCAGATACTA CTCTAGCACC
  R
  CACCTGTCTG CCTGCTGCCA TGCTCACTGT CATGATGTCT GTGGACAGTC TTGAACATTG
  AGTCCCAATT AAATGTTTAC TTTTATAATT TGCTTTGGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46494083	mCV25092013	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G	A
ss134261987	ENSMUSSNP4561414	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31188693					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:105759353 () rs orientation: forward

Symbol	Name	Function Class
Rr2553	regulatory region 2553	1448 bp proximal