rs31188711 SNP Detail

Summary

• ID
  rs31188711
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120151630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGCT TCCATCTACC TGGCAGTGAA
  S
  CCTGCTCTGG GCTGTGTGGA GAGAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46006192	mCV24274136	ABI	CRAMUS_MOUSE	f	SNP	G	C				G	G
ss47191090	NES11570180	PERLEGEN	MM_PANEL2	f	SNP			G	G	G			C	C	G
ss145822372	ENSMUSSNP3468405	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs31188711					SNP	G	C	G	G	G	G	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47191090	NES11570180	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120151630 () rs orientation: forward

Symbol	Name	Function Class
Gm32916	predicted gene, 32916	628 bp upstream
Rr654730	regulatory region 654730	443 bp proximal
Tssr68785	transcription start site region 68785	632 bp upstream
Tssr68786	transcription start site region 68786	653 bp upstream