rs31188733 SNP Detail

Summary

• ID
  rs31188733
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117770206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTGAGAA TCATTCAGGT
  GCAGGCCAAA GTAGGAGGCA GAACCAATTG TCTTAAGGCA AAAGCCTTTG TACCCTATTG
  TTGCCAAGCT AGAAAATGTT AGCATGGGCA AGCTCACAGC AAAGAAGACA TGGTGCTTTT
  GCACCTGATG AGGGCAGAAC CATGAGTCAA ACTGAACACC TGGGGCTCAT GCAAATTGTG
  Y
  ACCTAGAAAC TCTTATAAAA CCTACTTATT TGTATCTATC ATGTGGGTTC CTCAGGAAGT
  AGAATTCCTT TACAAAACAG CAACAACAAC ACCCCAATAC CCCTCTTATG TCAATGCTTA
  GCATCTCTGT CAAATTAAGC TTATTTGCTC TGATTTCATT GTAATGAGAC AAGTGGCAGC
  CTGGTTGCTC CCTGTTATGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45508395	mCV23489824	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss135695335	ENSMUSSNP4477503	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss320900747	CHEV_3_117679475	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs31188733					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117770206 () rs orientation: forward

Symbol	Name	Function Class
Gm32344	predicted gene, 32344	within coordinates
Rr583879	regulatory region 583879	549 bp distal
Rr583880	regulatory region 583880	729 bp distal