rs31190249 SNP Detail

Summary

• ID
  rs31190249
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:154381099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCCTCCCC CTTCCCTGGG GCCTCAAGAC TCATGAGGTT
  AAGGTGTATC TCCTCCCACT GAGGCCAGAC CAGGCAGTCT CCTGTTCCAT ATTTACCTTA
  Y
  GGAGGGCCTG AGACCAGTGA GTGTTGCCTG GTTGGTGGCT CAGCCTCTTG GAACTCCCTG
  GGGTCTGGGT TAGTTGAGAC TGCTGCATGA AGCAACAGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45507464	mCV24629908	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss136117759	ENSMUSSNP5013873	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31190249					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154381099 () rs orientation: forward

Symbol	Name	Function Class
D3Mit162	DNA segment, Chr 3, Massachusetts Institute of Technology 162	1068 bp distal
Gm38139	predicted gene, 38139	within coordinates