rs31192681 SNP Detail

Summary

• ID
  rs31192681
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146015179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGCGGAG GGCTCACCTT
  TCCAAACACA AACAGAAAAC AGTGTGAGCA GCTTGAGGCT GTATGATTTC AAAGCCTGAC
  CCAGTGACAC ACTTCCTCAC AAGGCCACAC TCCGTAAACC TGCCCCAAAA GCACCACCAA
  CTACCAACCA AGTGTTCGAA TGTCTGAGCT TATGGGGAAA ACATCTCATC CAAACGACCA
  Y
  GCAGGCCACT TGCAATGTAC AAGAAAAGAA AATGATAGAA ACTCTGGAAA ACGTTAGGTT
  TCTTAATCTG TAACTTTAAT AGATCGAATA TTAATCTTTA AAAGCATTGT TAAGCTCTAA
  ATAGTTTTTT ACGGCCCTCA GAAAAACCAT CTAAGGGTAC CAAAGAGCAT ACTTTGAACA
  GAAGCAACAT AAAAACAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47026274	NES10847562	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	T	C	T	C	C	C		C	T	T		T
ss136042963	ENSMUSSNP6023025	ENSEMBL	ENSEMBL_Sanger	f	SNP		T					C
ss321009816	CHEV_3_145972388	CHEVERUD	SCREENING_POP	f	SNP										T				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs31192681					SNP	C	T	C	T	C	T	C	C	C	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47026274	NES10847562	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146015179 () rs orientation: forward

Symbol	Name	Function Class
Rr586996	regulatory region 586996	1504 bp proximal