rs31193179 SNP Detail

Summary

• ID
  rs31193179
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135280921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGG TTGAGAGCCT CCACGTGGGC
  R
  CTGGGAACTG AACTGGGGTC CTTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45006428	mCV23631385	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss145531704	ENSMUSSNP7145911	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss319989348	CHEV_1_137249760	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs31193179					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135280921 () rs orientation: forward

Symbol	Name	Function Class
Gm56137	predicted gene, 56137	534 bp downstream
Lmod1	leiomodin 1 (smooth muscle)	within coordinates
Rr35730	regulatory region 35730	911 bp distal