rs31193295 SNP Detail

Summary

• ID
  rs31193295
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146015293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AATGTACAAG AAAAGAAAAT GATAGAAACT CTGGAAAACG
  TTAGGTTTCT TAATCTGTAA CTTTAATAGA TCGAATATTA ATCTTTAAAA GCATTGTTAA
  K
  CTCTAAATAG TTTTTTACGG CCCTCAGAAA AACCATCTAA GGGTACCAAA GAGCATACTT
  TGAACAGAAG CAACATAAAA ACAAAGCAAG CTTTCCATGC C                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ
ss47026278	NES10847570	PERLEGEN	MM_PANEL2	f	SNP	G	T	T	G	G	G	G	G
ss136042966	ENSMUSSNP1075931	ENSEMBL	ENSEMBL_Sanger	f	SNP		T			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ
rs31193295					SNP	G	T	T	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47026278	NES10847570	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146015293 () rs orientation: forward

Symbol	Name	Function Class
Rr586996	regulatory region 586996	1390 bp proximal