rs31194122 SNP Detail

Summary

• ID
  rs31194122
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146016534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTTACAC TAACTTTATG
  ACAAGTAGGC AGAAATTAGG ATTAGCATGA AACTATGCTA AATAGATTTT CCGTGAAAAC
  ACCAATATTT AGAAGATAGA GTATTCCAAG GTGAGCTGCT AGACCCAGCT AGCCTTTTTC
  AAAGAAAAGA TGGAGAGAAA TCTATTCCTT GATACAAACT CCTCGTTGCT TTGTCAAGCA
  Y
  GTAAATGGCT CGAGACAGTT CAGTGGGGAC TTCTCAAGGA GAATTTCTCT TTGAACAGAG
  CCAACGAATA AGGAATTCTA TAGTTTCCCC TAGAGAGCAC CCTCTGCAGC TTGGCACACC
  CTGGGACACT GTATTTGGCT CTATCCAAAG CACAGAAGCC AAGAGGACTG TCTAGCAGGT
  TTGGGGATGT CAAAGGCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47026296	NES10847510	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31194122					SNP	T	T	T	T	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47026296	NES10847510	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146016534 () rs orientation: forward

Symbol	Name	Function Class
D3Mit292	DNA segment, Chr 3, Massachusetts Institute of Technology 292	1017 bp proximal
Rr586996	regulatory region 586996	149 bp proximal