rs31194918 SNP Detail

Summary

• ID
  rs31194918
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146016782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTGAACA GAGCCAACGA
  ATAAGGAATT CTATAGTTTC CCCTAGAGAG CACCCTCTGC AGCTTGGCAC ACCCTGGGAC
  ACTGTATTTG GCTCTATCCA AAGCACAGAA GCCAAGAGGA CTGTCTAGCA GGTTTGGGGA
  TGTCAAAGGC TTGAGTCAGT TCCCAAAAGT GCAGGAACCA GGAATAGATG AGTGTTTTCT
  Y
  TGCATAGCCA GATGTGCTCA AAAGAGCTGG CAATCGGTCG GTCATGTTAG ATTAATCCAA
  ATACAGTGAA GAAGTTGAAG AAGTGAAGAG CATTCATTTC AGGAGAGACT GGGTATGCAC
  AGCGCTTCCC TTGGCCCTAA GGCAGACAAC TTCCAGACCG CAGTCAGTCC CTTCATTCAG
  ATCAAAAGAA ACCAGGCCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47026302	NES10847513	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	T	C	C	C	C		T		T	T		T
ss136043011	ENSMUSSNP5987304	ENSEMBL	ENSEMBL_Sanger	f	SNP						C					T
ss321009832	CHEV_3_145973991	CHEVERUD	SCREENING_POP	f	SNP									T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs31194918					SNP	C	T	C	T	C	C	C	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47026302	NES10847513	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146016782 () rs orientation: forward

Symbol	Name	Function Class
D3Mit292	DNA segment, Chr 3, Massachusetts Institute of Technology 292	769 bp proximal
Rr586996	regulatory region 586996	within coordinates