rs31195841 SNP Detail

Summary

• ID
  rs31195841
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:34886872 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCT TGGGCGGGGC CTTTTCTGAT
  Y
  CCCTGTGCCC AGGAGTTGGG GGTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46007792	mCV23195108	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss148804780	ENSMUSSNP6153130	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322156553	CHEV_7_35972466	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31195841					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:34886872 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18861	CpG island 18861	652 bp distal
Rr645330	regulatory region 645330	1725 bp distal
Rr645331	regulatory region 645331	1052 bp distal
Rr645332	regulatory region 645332	1458 bp distal
Slc7a10	solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	within coordinates
Tssr65893	transcription start site region 65893	1078 bp downstream
Tssr65894	transcription start site region 65894	1039 bp downstream
Tssr65895	transcription start site region 65895	1015 bp downstream