rs31199016 SNP Detail

Summary

• ID
  rs31199016
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61563541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGCCCAAC CTTAATTACA AATGGTTCTG TACTGCCTGT
  TCCAGAAAAT GATAACCATA TCTTTGTTTC AGAAAAGTGC AGCCATCTTA CAATCCAATC
  K
  TGGTTTTAAA AGGCTGCCAT GACCTTATGC CCCCCTTGGA ATCGCGTCTT TGTTTCAGGA
  GGTTATTATG ACTGATGTGT CATGCTTATG TTCTGCCCC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39264922	mCV23119382	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	T
ss139613000	ENSMUSSNP4166525	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31199016					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61563541 () rs orientation: forward

Symbol	Name	Function Class
Gm5461	predicted gene 5461	282 bp upstream
Gm62465	predicted gene, 62465	1138 bp upstream
Rr289706	regulatory region 289706	860 bp proximal
Rr297339	regulatory region 297339	1459 bp proximal
Tssr129059	transcription start site region 129059	198 bp upstream