rs31199988 SNP Detail

Summary

• ID
  rs31199988
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43424724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAAGAGGAA ACAAGGATCC AAAGACAAGC AGGGACAGAA
  GCCTAGAGGC AGAGACCAAA ATCACACACA CAGAGGGGAG AGAGGGATGT GGGGGCCCGA
  R
  ACTCTGAGAC CTGCTGGAAA AAAAAAGGGT ATACCTACAA GAAGAGGAGA CCACAGGGAG
  AAGAGGGGCT CAGACAAGTG ATATCTTGTC TCCCAGACC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss46007340	mCV24371653	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs31199988					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43424724 () rs orientation: forward

Symbol	Name	Function Class
Klk11	kallikrein related-peptidase 11	within coordinates
Klk12	kallikrein related-peptidase 12	1719 bp downstream
Tssr66041	transcription start site region 66041	678 bp downstream
Tssr66042	transcription start site region 66042	664 bp downstream
Tssr66043	transcription start site region 66043	652 bp downstream
Tssr66044	transcription start site region 66044	636 bp downstream
Tssr66045	transcription start site region 66045	966 bp upstream