rs31201169 SNP Detail

Summary

• ID
  rs31201169
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:17904977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCCA GATGTTTGTA TGACCGCTCT
  R
  CCAGGAATTT TTATCTGTAT TTTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
ss49214117	NES12668798	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A		A		G
ss325543286	CHEV_18_17930429	CHEVERUD	SCREENING_POP	f	SNP							G		G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
rs31201169					SNP	A	A	A	A	G	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49214117	NES12668798	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:17904977 () rs orientation: forward

Symbol	Name	Function Class
Tssr150152	transcription start site region 150152	1452 bp upstream