rs31201712 SNP Detail

Summary

• ID
  rs31201712
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74593014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGACAGGA AGCTGATCAA
  TCACAACTTT ACAGCAAACA AGAAACAGAG TGAACCGGAA GTGAAGTCAG GCTATGAACT
  CTTCGAGTCC CTAGAACTCG AAGGAACTGC CCATTCAATG ACATACTTCC TCTACCAAAG
  TTATACGTCC TACAAGTTCC GAAGCACCCC TAAACAGGAA AGGGGGCTCG CCAGCTAGCC
  R
  TTGTACCCTC ATGTCTTTCG CAGCTGCAAG TGCTCTTGGA AGATAGAGTA GATGGGAAAT
  AGATGACTGA AACGGGATTT CGTGGTGCGA CCTCCTCAAG GTCTTTGCAA TGATTCAGTT
  GCTTTGGGAT CTTCTGTGCT CCTGCAAATA ACCCTTCATG CACACTGTAT ATGTAAGCCA
  AATGAAATTA TTAGTCACTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ
ss39265129	mCV22715068	ABI	CRAMUS_MOUSE	f	SNP		A	G		G
ss52506932	NES15580648	PERLEGEN	MM_PANEL2	f	SNP	A		G	G			G	G
ss139742245	ENSMUSSNP2974693	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ
rs31201712					SNP	A	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52506932	NES15580648	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74593014 () rs orientation: forward

Symbol	Name	Function Class
4933402J15Rik	RIKEN cDNA 4933402J15 gene	within coordinates
Gm49171	predicted gene, 49171	within coordinates