rs31204435 SNP Detail

Summary

• ID
  rs31204435
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36633386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GACGgggtg tggtggcgca cgtctttaat
  cccagcactt tggaggcaga ggcaggcgaa tttctgagtt caaggccagc ctggtctaca
  gagtgagttc cagaacagcc agggctacac agagaaaccc tgtctcgaaa acaaacaaac
  W
  aacaaacaaa ACTCATGGAa gccaggcggt ggtagcacac acctttaatc ccagcacttg
  ggaggcagaa gcaggtggat ttctgatttt gagaccagcc tggtctacag agtgagttcc
  atgacagcca gggctacaca gagaaacaaa                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45007612	mCV22351189	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A	A
ss148928426	ENSMUSSNP7105936	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		A
ss319689125	CHEV_1_36651150	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31204435					SNP	A	A	T	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36633386 () rs orientation: forward

Symbol	Name	Function Class
Fam178b	family with sequence similarity 178, member B	within coordinates
Tssr11268	transcription start site region 11268	967 bp upstream