rs31207724 SNP Detail

Summary

• ID
  rs31207724
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110684349 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTTTCTG TTGGTCTCAG
  GATCTCATTG AACTTTATAG GGCTGAACCA CAGTCCCCAG AGGACTGCAG GGTGCCTTGT
  TTGCTGGGAG GGATTGAAGT GGGGGTAGGG GTGAGGAGAT GACGTGGCGG CTTCCCCGAC
  AAAGAAAAAG CCACAAAGGA TCCACTCTAA TGTGGACTCA AAAGCCATCA GCTGACCTGC
  M
  TCCAGGTTCA TCTTTCCTGC TCTAGCCAGC CCTGATGCAC AGGGCTGTGT CTCTCCGAAC
  AGTGCTCCTC TGTGCACCTG CCTGGGAGCT CTGAACTTCA CACACACCCC TGCCCGCCTC
  CTCTGTTCTC AAACCCCACC CCTCCCCATC CCCCATCTCC AAGCTCTCCA ATCCGGGACT
  TCCATACCCA ACCGCTAGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47528734	NES11188086	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31207724					SNP	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47528734	NES11188086	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110684349 () rs orientation: forward

Symbol	Name	Function Class
Marveld3	MARVEL (membrane-associating) domain containing 3	within coordinates
Rr173817	regulatory region 173817	52 bp proximal
Rr401124	regulatory region 401124	304 bp downstream
Rr401125	regulatory region 401125	173 bp upstream