rs31211045 SNP Detail

Summary

• ID
  rs31211045
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110672630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTTCTTG GCAGCACACT
  CAGCTCTTTC GGTGTGCCTG CCAGGCAAGC ACTGTACCCC CGCTTCTTGA TACCTCTGTC
  CCATGTGATA TATGGGCTGA GGTGGCACAA GTGGTCTCAA GTTTGTTTTC CAGTGCCAGT
  GATATTCCAC GGCGTCCTGA AGGCCACAAG GACTTGTCTG TTACTTGTAA CACACCTCTA
  K
  TATGACTCAG AGGGCCGTGG TGGTGGTGGT GGTGGTGTGT GTGTGTTTAA GATCTATTTT
  TCTTTTTAAT TATGGGTGTG TGTGTGTGTG TGTGTGTGCA CATGTGCTTG TGGACTCCAG
  AGGAAGATAG CAGGTCCCCT GGAGGTTTAG TTATAGGAGG TTGTGGGCCA CCTGATTGGA
  TGCTGGGAAA AGCATCCTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47528581	NES11188562	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31211045					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47528581	NES11188562	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110672630 () rs orientation: forward

Symbol	Name	Function Class
Marveld3	MARVEL (membrane-associating) domain containing 3	1916 bp downstream
Phlpp2	PH domain and leucine rich repeat protein phosphatase 2	1327 bp downstream
Rr669766	regulatory region 669766	within coordinates
Rr669767	regulatory region 669767	333 bp proximal
Rr669768	regulatory region 669768	1540 bp proximal