rs31211051 SNP Detail

Summary

• ID
  rs31211051
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110673023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCCTCATA ACTGCTAAGC
  CATCCCTCTA TTCTGTGTCC AAGTCTTATC TCCGCTGCTT ACAGGTTTTG TGACTGTGGG
  AAAGTTAACC TGTTTAAAGC AGTTTAACAT TGAACAGAAG TCACAGCTTC GGTCATTTGT
  GCCAAAGTGG TAGATAGGAA GAACTTCTAT ACCACTGAAC AATAATGTTC TGCAGTGAGT
  Y
  GCTGGTAAGG AACATCAGCC CTTGCCCTTC TTGGACCTTG CCTCCTCATT TGTAGCACAC
  GAATGACAAG TCAGCGTAAC CCGACAAATA GTGAATCCCA TCGGGTTTGC TAGAGGGTTT
  CTAGTACTGA ACTCTGGACT TGTGGCAGTG TGGTTAGTTT ACTCCCTGAT GGGTTCTAAT
  CAGAAGAGGA GCTGCCACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47528587	NES11188522	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31211051					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47528587	NES11188522	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110673023 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21023	CpG island 21023	1625 bp proximal
Marveld3	MARVEL (membrane-associating) domain containing 3	1523 bp downstream
Phlpp2	PH domain and leucine rich repeat protein phosphatase 2	1720 bp downstream
Rr669766	regulatory region 669766	356 bp distal
Rr669767	regulatory region 669767	within coordinates
Rr669768	regulatory region 669768	1147 bp proximal