rs31211704 SNP Detail

Summary

• ID
  rs31211704
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:138799801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCATGGGAGC TGCAGGACAA GCTATGGATG GACTGAGGGG AGGGCACATG CCTGGCCAGT
  TAGCTGTTGG TGAGACTGCA GAGATGGATC TCTGGGCTGT TGCCACCCAG TCATGCCTGC
  CTGCCCTGGC CACCTGGTCT TCTGGGCCCA TGTCCTACAT AGAGTGCCTT TCTTCCTCAC
  AAGGGAACCA TCTTCTATGC TAGGATATCT GAGTGGTTTT CATCCACAAA TAATTTTATT
  GTTAACACTC TGGCGAGTAA TCTGCTGCTA AGGGATCCCA CTTCCTGCGT CGCCCCAAAA
  R
  ATTCCTGGAT TTCAGATCTG GAATCCTTGG ATTTTGACAG TCAAAGCCAG CTGCTTTGTG
  TTGTTTAAGT TATAATCGAG CCTCTGATTT TACACCCATT ATGTCATTAA AATTGAATCC
  ACTTGCTGAA GGGCTGAAAC ATATTAATTA GAAAATTTAA GTAATTATGG GCTCATTAAA
  GGCTTTAAAG TTAAAAAACT AATGAAAACA ATAGTATCAT CAGAGCTCTC CCCACCTTCA
  CCACATGTGG ATGTTTCAGC ATGGCACAGA GATTAAAACA AGATCTGTTG ATTCCTTCTC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46008647	mCV23696911	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31211704					SNP	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:138799801 () rs orientation: forward

Symbol	Name	Function Class
Lrrc27	leucine rich repeat containing 27	within coordinates
Tssr69706	transcription start site region 69706	689 bp upstream