rs31212676 SNP Detail

Summary

• ID
  rs31212676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110674393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCCTTTC CCAGACGACT
  TGCGGACCAT TGTGAGACAC AGTGGGTGCT GGGAAGGGAA CCTGGGTCTT CTGCAAGAGT
  AGCCAGTGCC CCTAACAGCT GAGCCATCTC TCCAGCCCCT CCCCATTGCC TTTATGCGGT
  TCCCACTACA GTTATTTACA GTTTGAGGGA GGAGTTCTAC TGTAGCACGG CACATGCTAC
  Y
  CTCTGATGTG TCTTCTCTGG CTGGTCTCCT ACTTAATTAA CACTATAGCC TTACCACAAG
  GCAGAGCCCT ATTTTCAAAG AATGATCCCG CCCCGCCCCA CCTCCGCCCC CTAAGCTTTC
  ATTGGAGTGG TCCAGCAGAC TGATTGGTCT CCTTTCACAA CTTTACTCTG CTCAGGTGCC
  TGAGCACTGA GGGAGCTTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47528602	NES11188480	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31212676					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47528602	NES11188480	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110674393 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21023	CpG island 21023	255 bp proximal
Marveld3	MARVEL (membrane-associating) domain containing 3	153 bp downstream
Rr669766	regulatory region 669766	1726 bp distal
Rr669767	regulatory region 669767	1127 bp distal
Rr669768	regulatory region 669768	202 bp distal