rs31212746 SNP Detail

Summary

• ID
  rs31212746
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110713595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAGGA GTTGTTTTCT
  ACAGAGACAG GTGAGAAGCA TGCACAGATG CCTCAAAAAC ACAGGGGCCA AGAAAATGTG
  AATGATAGTC GTCTTTGATT AACTGATGGG GGGAAAGGAA CAACTTTAAT ATTATTCTGT
  CAATCATTTT GAGAAACGTT TATTTTAGAA AACAGTTCTT GAAGGTTTAC CACTGGATAG
  K
  AAGGTAATTG ACTAGCCTTT CTGAAAATAA AACCATTAAT GAGTCTAAAA AAGTGTAAAG
  TTGGGGTGTG GTGGCTCACA CCGGTCCTCT CAGCACCTAG GAGGCAGAGA GACAAAGATG
  GTGGTGAGTT GGAGGCCAGC TTGTGGTGCT TGAAATGTTC AAAACTAAAA CAGAACTGTT
  TAAAAACTAA GACTCTGGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47529127	NES11186810	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31212746					SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47529127	NES11186810	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110713595 () rs orientation: forward

Symbol	Name	Function Class
2010109N18Rik	RIKEN cDNA 2010109N18 gene	207 bp downstream
Gm64950	predicted gene, 64950	217 bp upstream
Rr382637	regulatory region 382637	500 bp downstream
Tssr79380	transcription start site region 79380	287 bp downstream