rs31214239 SNP Detail

Summary

• ID
  rs31214239
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:7886881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGGCTATA GAAAGGCAAA
  AACCGCAAAC ACCTGGTATC CTGGAACAAT GGGGGCTATT TTGGACACAG GTCTAGGGGC
  TTAAATATTT TTTTACTCTC TGTCAGGATC TTTTAGGTGT TTGGTAGTTA GTATAAACTC
  TCAATGTGGT ATCATGTAGG ATCATTGAAG GGAAAGTCTT GGACATGTCT GTGAGAGATT
  W
  TCTACATTAA GTTAGTCAAT GTGGTGAGAT AAACCCTAAG TGTTGGTGGT ACCATTTCAT
  ATACTGGGGT CCTAGACTAA AAAATGAGAA AGTAAGCATT CACTTCTCTC TGTTCCCAGA
  CTGTAGAGGC AAGGGACCAT CTTACACAAG CTCCTGCCAC CACACCTGAC TCACTGTGAT
  AGACTGAAAG TTCAAATTGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39265769	mCV24308242	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss139097615	ENSMUSSNP2359308	ENSEMBL	ENSEMBL_Sanger	f	SNP			T	A
ss324560107	CHEV_14_15415396	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31214239					SNP	A	A	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:7886881 () rs orientation: forward

Symbol	Name	Function Class
Gm62777	predicted gene, 62777	259 bp upstream
Rr389213	regulatory region 389213	777 bp upstream