rs31214967 SNP Detail

Summary

• ID
  rs31214967
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:48342133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTACTGCCT GCAGGCTTCT
  GGGACATCCT CCTTACTGCT ACCATGGCCA AGAAGAAGGT CAACATAGCA CTCAGTAGCA
  GGGCAATGAA AAAAAACTCA AAATGTGATC AGCAGGTATG GTGGCTAAAC CTGCTTCTGC
  AAGGGTAGAA ATGAAGGAAA CTAAAAAGGC AGCAGAAAAG GATATACCTC CAATAAAAAT
  Y
  ATGCTTTTGG TGAAATAACC ATTTTCACTA TGTTAATCCT ACTGATCATG AACTTGGAAG
  ATCTTTCTAT CTTCTGATAT TTCTTCAGTT TCTTTCTTCA AAGACTTGAC ATTCTTATCA
  TCTAGGACTT TCACTTGCTT GGTTAGAGTT ACACAAAGGC ACTTTATATT ATTTGTAGCT
  AATGTGAAGG GTGTTGTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46008981	mCV24993912	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss149205785	ENSMUSSNP3391271	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31214967					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:48342133 () rs orientation: forward

Symbol	Name	Function Class
Tssr72617	transcription start site region 72617	611 bp upstream
Tssr72618	transcription start site region 72618	604 bp upstream
Tssr72619	transcription start site region 72619	578 bp upstream
Tssr72620	transcription start site region 72620	556 bp upstream