rs31219007 SNP Detail

Summary

• ID
  rs31219007
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110709560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATGCTCA CAGTTGCAGC
  GAGAAGCGAG AGGCGGGCTC TTACCGCTCT GGGCTGTTAT TTGTGGGTGC TCAGCAGGAA
  ACAGATGACG CAGGCAACCT ACTGACAGTT TATGAAAGAG ACTCTCACTT GTGACTGTGT
  TCTAGCAGGA CTTGTCTGTG GCCTCTTATG CTTCTGAGCA GCGACTGGGA ATGATTACAT
  R
  GGGCACACTT GGGGGTTCGC ATGAGGTCAT AGACATCTTG GTCCAAAGCC AGCAACGGGC
  TCTGATGGGC TGGCCATCCA AGATGGCTTC TTTATCTGTT CAGCACCCCA ATAGTTTTGT
  GTCCCCTCTT TGGCAAAACA CACTTTCTTT TATTTTTAAT TTTACCCTTA TATTGTTTCA
  TCTTATTAGT TCTTTCCCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47529097	NES11186997	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31219007					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47529097	NES11186997	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110709560 () rs orientation: forward

Symbol	Name	Function Class
Gm64950	predicted gene, 64950	within coordinates
Rr173822	regulatory region 173822	1641 bp proximal
Rr182743	regulatory region 182743	within coordinates
Rr187609	regulatory region 187609	641 bp proximal
Rr382637	regulatory region 382637	1906 bp upstream