rs31221880 SNP Detail

Summary

• ID
  rs31221880
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:68950385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCC ACAATAACTA TTTCTCACCC
  R
  CCATCAAAAA GAAACCTTGG ATAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
ss45008797	mCV25025402	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss144624910	ENSMUSSNP700034	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G			A
ss319776952	CHEV_1_68957800	CHEVERUD	SCREENING_POP	f	SNP				G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
rs31221880					SNP	G	G	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:68950385 () rs orientation: forward

Symbol	Name	Function Class
Erbb4	erb-b2 receptor tyrosine kinase 4	within coordinates
Tssr12045	transcription start site region 12045	321 bp upstream