rs31222755 SNP Detail

Summary

• ID
  rs31222755
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:146472533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGTCCTCA TCGGACAGAG
  GTCCGTCCTC ACTGGGGGCA AAAGCAGCGC TTTCAGTGTT CGGCTCATGT GTTCTCGGTC
  AGACAGAGGA GAGGGCGTGA ACCAGCTGCT CACTCCTGCT TAGGTCCACA CACTTCCGAG
  AACCATTACT TAGTGCTTTT TCTTCACACT GACGCTCAGT GAGCTGCACC AGGAAGCAGG
  M
  TCCCCGAGCA GCCTAGAATT TGTACATATC TGCAGTGTGT CACATGATGT TTCCATAAGT
  GGATGTCCTG TGTGATGTGC AAATCAGAGT GAGCGGATCT GTCTCCTCCT GCCTATTTTT
  GCAGTGAGAT CATAAGAAAT CTTCTTCCAC TGAAACAACA GAATGCAAAA TCATCCTCTC
  TAGTCACCCC ACCGTGTACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss47030626	NES10852813	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs31222755					SNP	C	C	C	C	C	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47030626	NES10852813	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146472533 () rs orientation: forward

Symbol	Name	Function Class
Gm40170	predicted gene, 40170	within coordinates
Prkacb	protein kinase, cAMP dependent, catalytic, beta	Intron
Rr375878	regulatory region 375878	1474 bp upstream
Rr587080	regulatory region 587080	1347 bp distal
Rr587081	regulatory region 587081	within coordinates