rs31223305 SNP Detail

Summary

• ID
  rs31223305
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146423897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCAGATGC GAAGCACTCG
  GCTCTCTCAA GACAGCAGAG ACATCTCCAT TAGCCTTTAG TTCTGCCTAG AAATGGGCTT
  CACGTGGCAC AGTAGAAGTA CCCTCCCTAG AAGAATCTGA GGTTGATTTG TGCTGCTCCA
  ACTACATTGC CACGCTAGTG ATTGCCGTGA ACTCAGTTTC TTTCCTATAA CATAGGAGAC
  R
  TAGCATCACA CTGGAAGGGC TTATGACAGG AATGACTAAG ATGTTCTTTT TAAGTTGAAA
  CTGGTCTCAA TATTTTACAG AGCATTATGG AGACCTCATT TTTCCAGGTA CTCAGTTAGA
  AGGGCACGGA GGGGAGTGGG TGACATTTGT AATGGATTTG AGTCTGAGCC TCTCCAGTGT
  CATAATGAGA CTCCGAGCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47029988	NES10855309	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31223305					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47029988	NES10855309	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146423897 () rs orientation: forward

Symbol	Name	Function Class
Rr587074	regulatory region 587074	124 bp proximal