rs31229382 SNP Detail

Summary

• ID
  rs31229382
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:193911561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATG CAATATGAGA ATGTTTATTA
  Y
  TCCTAATGGT CCTTCCATTA GGGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45009253	mCV24146330	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss146537854	ENSMUSSNP2284411	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31229382					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:193911561 () rs orientation: forward

Symbol	Name	Function Class
Rr914	regulatory region 914	1266 bp distal
Rr426630	regulatory region 426630	1836 bp distal
Rr426631	regulatory region 426631	1803 bp proximal