rs31232603 SNP Detail

Summary

• ID
  rs31232603
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124019013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCATGCTACA GCTCCTTATA TGACAGTGTC TGACAAACAT ATGATGACAT ACTAATGTTG
  TACCCACAAT TTCTTCTGTG ACAGTGATCA ATATGTAAGC TTATATTATA CAAGGTGGTT
  CACACTTCTA AGGATTTTAA ATAATTTTAT TGTGTAACTG CCAAGTTATT AAAGATTTAT
  TCAAAGGGCA AAATGAGTGC TGTTTTGTGA TAAATGTGAG TTAATATTGT ATTTCTTTCT
  AACATTTTAA AACATGCCAT TTTGAACTAT TTCATAAAAA CTAATCAAGC TGTATAAAAA
  W
  ATGGATTAAA ATATTCCCTT TTTTTAACTA TCTTGGTGGA AAGCCTTTGT TGTTTGTATG
  TTCTCATAAT AAATATTCTA ACTACTAGTT TTGTGTGATA TCCCCGAGGA AAACAGTGTG
  AACGGTGTGA CACATGACAG TAGACTAATT ATTTACAGCA GCTTCAAGGG AAGGTAAAGA
  ATGTCATTTC TACACCTAGG AAAAATGGTG TAAATCCATC AGCTTGCTTT ACTTTAACAT
  CTTCTGTAAT GTTCAAAGTG CTGAACAATA GCGGCTAGAG GTAGTTCAAA GAACCCTTCC
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45511176	mCV25183700	ABI	CRAMUS_MOUSE	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31232603					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124019013 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	815 bp proximal