rs31232972 SNP Detail

Summary

• ID
  rs31232972
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:105759431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCAGATAC TACTCTAGCA CCGCACCTGT CTGCCTGCTG
  CCATGCTCAC TGTCATGATG TCTGTGGACA GTCTTGAACA TTGAGTCCCA ATTAAATGTT
  Y
  ACTTTTATAA TTTGCTTTGG CTATAGTGTT TTACTACAGC AATCAAACTT TAACCAAGAA
  AGTGATCTTA CTAAAAAGTT TTTTTGTATA ATTAATTCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46500035	mCV25092012	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss134261990	ENSMUSSNP509974	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31232972					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:105759431 () rs orientation: forward

Symbol	Name	Function Class
Rr2553	regulatory region 2553	1370 bp proximal