rs31234085 SNP Detail

Summary

• ID
  rs31234085
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43060209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCCCTTTC CTTATGTCTG TCTCTCTGCC CCTCTTTATC
  TATCTTTATG CCTCTGTCTG TCTGTCTCTG TGTGTATGTA TTTGTCTGTC TGTCTGTCTC
  Y
  GTCTTTGTGT CTATCTCTAT GTCTATAACC ATCTCTCTCT CTCTCTACCT TCATCCTTCC
  TCTGTTTCTC TGTCTCATTT TTGTCTGTTT CTCTCTTCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46011016	mCV22794630	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss149071771	ENSMUSSNP3127526	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss322196849	CHEV_7_50666155	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31234085					SNP	T	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43060209 () rs orientation: forward

Symbol	Name	Function Class
Siglecg	sialic acid binding Ig-like lectin G	within coordinates
Tssr65991	transcription start site region 65991	1523 bp downstream
Tssr65992	transcription start site region 65992	1512 bp downstream
Tssr65993	transcription start site region 65993	1484 bp downstream
Tssr65994	transcription start site region 65994	1365 bp downstream